PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015873487.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family Dof
Protein Properties Length: 164aa    MW: 18247.8 Da    PI: 9.386
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015873487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.12e-3845103260
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                     +ek+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k 
  XP_015873487.1  45 PEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKP 103
                     68999***************************************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-2944102IPR003851Zinc finger, Dof-type
PfamPF027017.3E-3247102IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.36949103IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105187IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010214Biological Processseed coat development
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MAEGRINGQD VAGIKLFGAT ITLQNRSQVK DEANDKTHQT VEKRPEKIIP CPRCKSMETK  60
FCYFNNYNVN QPRHFCKGCQ RYWTAGGALR NVPVGAGRRK TKPPCRGLAG LPEGCLYDAS  120
EVVHQFDLDG VMEEWHLAAS QGSFQQVFPV VKRRRSGSGG QTCS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00166DAPTransfer from AT1G29160Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0926799e-42BT092679.1 Soybean clone JCVI-FLGm-11D11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015873487.11e-122PREDICTED: dof zinc finger protein DOF1.5
SwissprotP683503e-57DOF15_ARATH; Dof zinc finger protein DOF1.5
TrEMBLM5X2T01e-100M5X2T0_PRUPE; Uncharacterized protein
STRINGVIT_10s0003g01260.t016e-80(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64833251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29160.12e-58Dof family protein